BioThings APIs

We build a collection of high-performance biological APIs

BioThings SDK

A Software Developement Kit to turn a data file to an API


See the tutorial and the docs (in-progres)

SmartAPI

Build interoperability across APIs

What's new

VAPr - A python package for efficient Variant Analysis and Prioritization

One of our pride points for being able to pool, standardize, and share gene, variant, and other...

Making functional inferences from evolutionarily constrained regions with Aminode

One of our pride points for being able to pool, standardize, and share gene, variant, and other...

Data release updates and metadata deprecations

Beginning with this latest data release, the structure of the metadata in MyGene.info has...

Going from open access data to an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer

One of our points of pride for being able to pool, standardize, and share gene and variant...

Visualizing and analyzing pathways with MinePath

One of our pride points for being able to pool, standardize, and share gene, variant, and other...

Fungi and protists and plants...oh my!

Billie Aprils here-- Do you need up-to-date gene annotations from multiple resources in an easy...

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Our Team

Cyrus Afrasiabi

Cyrus Afrasiabi

Research Programmer

Sebastien Lelong

Sebastien Lelong

Research Programmer

Jiwen (Kevin) Xin

Jiwen (Kevin) Xin *

Staff Scientist

Ginger Tsueng

Ginger Tsueng *
@GTsueng

Staff Scientist

Marco Alvarado

Marco Alvarado

Research Programmer

Jerry Zhou

Xinghua (Jerry) Zhou

Research Programmer

Andrea Hom

Andrea Hom

Administrative Assistant

Join us

If you are passionate about Bioinformatics, Data Science, Semantic Web, Machine-learning and Genomics, you are welcome to contact us (cwu -at- scripps -dot- edu) and we will find a suitable position (Scientist, Developer, PostDoc or Graduate Research Assistant) in our team.